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Cluster: HRGMv2_1453_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1453_29 HRGMv2_1453_29_10 9581 11086 + GH77
CAZyme HRGMv2_1453_29 HRGMv2_1453_29_11 11215 13482 + GT35
TC HRGMv2_1453_29 HRGMv2_1453_29_12 14017 15216 - 3.A.1.1.22
TC HRGMv2_1453_29 HRGMv2_1453_29_13 15284 16123 - 3.A.1.1.45
TC HRGMv2_1453_29 HRGMv2_1453_29_14 16123 16977 - 3.A.1.1.45
TC HRGMv2_1453_29 HRGMv2_1453_29_15 17065 18381 - 3.A.1.1.45
TF HRGMv2_1453_29 HRGMv2_1453_29_16 18688 19407 - GntR
NULL(UNKNOWN) HRGMv2_1453_29 HRGMv2_1453_29_17 19491 19610 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1453_29 HRGMv2_1453_29_18 19632 22082 + 4.A.1.1.8
Gene ID: HRGMv2_1453_29_10
Type: CAZyme
Location: 9581 - 11086 (+)
Gene ID: HRGMv2_1453_29_11
Type: CAZyme
Location: 11215 - 13482 (+)
Gene ID: HRGMv2_1453_29_12
Type: TC
Location: 14017 - 15216 (-)
Gene ID: HRGMv2_1453_29_13
Type: TC
Location: 15284 - 16123 (-)
Gene ID: HRGMv2_1453_29_14
Type: TC
Location: 16123 - 16977 (-)
Gene ID: HRGMv2_1453_29_15
Type: TC
Location: 17065 - 18381 (-)
Gene ID: HRGMv2_1453_29_16
Type: TF
Location: 18688 - 19407 (-)
Gene ID: HRGMv2_1453_29_17
Type:
Location: 19491 - 19610 (-)
Gene ID: HRGMv2_1453_29_18
Type: TC
Location: 19632 - 22082 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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