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Cluster: HRGMv2_1453_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1453_3 HRGMv2_1453_3_9 7572 8930 - 2.A.33.1.1
pfam HRGMv2_1453_3 HRGMv2_1453_3_10 9198 10121 - DHH | DHHA2
STP HRGMv2_1453_3 HRGMv2_1453_3_11 10288 11241 - Glucokinase
TC HRGMv2_1453_3 HRGMv2_1453_3_12 11483 11815 - 4.A.3.2.3
TC HRGMv2_1453_3 HRGMv2_1453_3_13 11825 12127 - 4.A.3.2.9
TC HRGMv2_1453_3 HRGMv2_1453_3_14 12289 13632 - 4.A.3.2.2
CAZyme HRGMv2_1453_3 HRGMv2_1453_3_15 13753 15153 - GH1
Gene ID: HRGMv2_1453_3_9
Type: TC
Location: 7572 - 8930 (-)
Gene ID: HRGMv2_1453_3_10
Type: pfam
Location: 9198 - 10121 (-)
Gene ID: HRGMv2_1453_3_11
Type: STP
Location: 10288 - 11241 (-)
Gene ID: HRGMv2_1453_3_12
Type: TC
Location: 11483 - 11815 (-)
Gene ID: HRGMv2_1453_3_13
Type: TC
Location: 11825 - 12127 (-)
Gene ID: HRGMv2_1453_3_14
Type: TC
Location: 12289 - 13632 (-)
Gene ID: HRGMv2_1453_3_15
Type: CAZyme
Location: 13753 - 15153 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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