dbCAN HGM

Cluster: HRGMv2_1451_CGC8

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1451_30	HRGMv2_1451_30_2	1203	3038	+	GT2
pfam	HRGMv2_1451_30	HRGMv2_1451_30_3	3138	4325	+	LicD
CAZyme	HRGMv2_1451_30	HRGMv2_1451_30_4	4358	6199	+	GT2
CAZyme	HRGMv2_1451_30	HRGMv2_1451_30_5	6231	7160	-	GT81
TC	HRGMv2_1451_30	HRGMv2_1451_30_6	7322	8167	+	3.A.1.103.6
TC	HRGMv2_1451_30	HRGMv2_1451_30_7	8180	8947	+	3.A.1.103.1

Gene ID: HRGMv2_1451_30_2
Type: CAZyme
Location: 1203 - 3038 (+)

Gene ID: HRGMv2_1451_30_3
Type: pfam
Location: 3138 - 4325 (+)

Gene ID: HRGMv2_1451_30_4
Type: CAZyme
Location: 4358 - 6199 (+)

Gene ID: HRGMv2_1451_30_5
Type: CAZyme
Location: 6231 - 7160 (-)

Gene ID: HRGMv2_1451_30_6
Type: TC
Location: 7322 - 8167 (+)

Gene ID: HRGMv2_1451_30_7
Type: TC
Location: 8180 - 8947 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1451_30_2	vegan > omnivore	10.16692	0.00566
HRGMv2_1451_30_3	vegan > omnivore	17.71565	0.00566
HRGMv2_1451_30_4	vegan > omnivore	17.50578	0.00566
HRGMv2_1451_30_4	vegetarian > omnivore	12.51035	0.02579
HRGMv2_1451_30_5	vegan > omnivore	1.44440	0.00566
HRGMv2_1451_30_6	vegan > omnivore	1.94007	0.00566