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Cluster: HRGMv2_1451_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1451_27 HRGMv2_1451_27_10 11646 13151 + GH77
CAZyme HRGMv2_1451_27 HRGMv2_1451_27_11 13280 15547 + GT35
TC HRGMv2_1451_27 HRGMv2_1451_27_12 16005 17204 - 3.A.1.1.22
TC HRGMv2_1451_27 HRGMv2_1451_27_13 17273 18112 - 3.A.1.1.45
TC HRGMv2_1451_27 HRGMv2_1451_27_14 18112 18966 - 3.A.1.1.45
TC HRGMv2_1451_27 HRGMv2_1451_27_15 19056 20372 - 3.A.1.1.45
TF HRGMv2_1451_27 HRGMv2_1451_27_16 20679 21398 - GntR
NULL(UNKNOWN) HRGMv2_1451_27 HRGMv2_1451_27_17 21482 21601 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1451_27 HRGMv2_1451_27_18 21623 24073 + 4.A.1.1.8
Gene ID: HRGMv2_1451_27_10
Type: CAZyme
Location: 11646 - 13151 (+)
Gene ID: HRGMv2_1451_27_11
Type: CAZyme
Location: 13280 - 15547 (+)
Gene ID: HRGMv2_1451_27_12
Type: TC
Location: 16005 - 17204 (-)
Gene ID: HRGMv2_1451_27_13
Type: TC
Location: 17273 - 18112 (-)
Gene ID: HRGMv2_1451_27_14
Type: TC
Location: 18112 - 18966 (-)
Gene ID: HRGMv2_1451_27_15
Type: TC
Location: 19056 - 20372 (-)
Gene ID: HRGMv2_1451_27_16
Type: TF
Location: 20679 - 21398 (-)
Gene ID: HRGMv2_1451_27_17
Type:
Location: 21482 - 21601 (-)
Gene ID: HRGMv2_1451_27_18
Type: TC
Location: 21623 - 24073 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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