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Cluster: HRGMv2_1451_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1451_14 HRGMv2_1451_14_6 4077 5453 - GH13_20
TC HRGMv2_1451_14 HRGMv2_1451_14_7 5607 6803 - 2.A.1.2.18
TC HRGMv2_1451_14 HRGMv2_1451_14_8 6928 9288 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1451_14 HRGMv2_1451_14_9 9410 9730 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1451_14 HRGMv2_1451_14_10 9778 10677 - S09.UPW
TC HRGMv2_1451_14 HRGMv2_1451_14_11 10846 11487 + 4.A.1.2.6
pfam HRGMv2_1451_14 HRGMv2_1451_14_12 11669 13072 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1451_14 HRGMv2_1451_14_13 13331 14116 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1451_14 HRGMv2_1451_14_14 14277 15257 + 3.A.1.34.1
TC HRGMv2_1451_14 HRGMv2_1451_14_15 15461 16384 + 3.A.1.34.1
TC HRGMv2_1451_14 HRGMv2_1451_14_16 16377 17171 + 3.A.1.34.1
TC HRGMv2_1451_14 HRGMv2_1451_14_17 17364 18131 + 1.A.23.4.2
pfam HRGMv2_1451_14 HRGMv2_1451_14_18 18224 20140 + Bmp
pfam HRGMv2_1451_14 HRGMv2_1451_14_19 20137 20847 + Metallophos | Metallophos_2
TC HRGMv2_1451_14 HRGMv2_1451_14_20 20975 21682 - 1.C.82.1.1
Gene ID: HRGMv2_1451_14_6
Type: CAZyme
Location: 4077 - 5453 (-)
Gene ID: HRGMv2_1451_14_7
Type: TC
Location: 5607 - 6803 (-)
Gene ID: HRGMv2_1451_14_8
Type: TC
Location: 6928 - 9288 (-)
Gene ID: HRGMv2_1451_14_9
Type:
Location: 9410 - 9730 (-)
Gene ID: HRGMv2_1451_14_10
Type: peptidase
Location: 9778 - 10677 (-)
Gene ID: HRGMv2_1451_14_11
Type: TC
Location: 10846 - 11487 (+)
Gene ID: HRGMv2_1451_14_12
Type: pfam
Location: 11669 - 13072 (+)
Gene ID: HRGMv2_1451_14_13
Type:
Location: 13331 - 14116 (+)
Gene ID: HRGMv2_1451_14_14
Type: TC
Location: 14277 - 15257 (+)
Gene ID: HRGMv2_1451_14_15
Type: TC
Location: 15461 - 16384 (+)
Gene ID: HRGMv2_1451_14_16
Type: TC
Location: 16377 - 17171 (+)
Gene ID: HRGMv2_1451_14_17
Type: TC
Location: 17364 - 18131 (+)
Gene ID: HRGMv2_1451_14_18
Type: pfam
Location: 18224 - 20140 (+)
Gene ID: HRGMv2_1451_14_19
Type: pfam
Location: 20137 - 20847 (+)
Gene ID: HRGMv2_1451_14_20
Type: TC
Location: 20975 - 21682 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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