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Cluster: HRGMv2_1451_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1451_58 HRGMv2_1451_58_12 13756 14094 - 4.A.3.1.2
TF HRGMv2_1451_58 HRGMv2_1451_58_13 14309 15313 - LacI
TC HRGMv2_1451_58 HRGMv2_1451_58_14 15670 17439 + 4.A.3.1.1
CAZyme HRGMv2_1451_58 HRGMv2_1451_58_15 17506 18945 + GH1
TF HRGMv2_1451_58 HRGMv2_1451_58_16 19212 20249 - LacI
CAZyme HRGMv2_1451_58 HRGMv2_1451_58_17 20591 22033 + GH1
TC HRGMv2_1451_58 HRGMv2_1451_58_18 22210 23970 + 4.A.3.1.1
TF HRGMv2_1451_58 HRGMv2_1451_58_19 24383 25393 - LacI
TC HRGMv2_1451_58 HRGMv2_1451_58_20 25669 27447 + 4.A.3.1.1
CAZyme HRGMv2_1451_58 HRGMv2_1451_58_21 27523 28944 + GH1
Gene ID: HRGMv2_1451_58_12
Type: TC
Location: 13756 - 14094 (-)
Gene ID: HRGMv2_1451_58_13
Type: TF
Location: 14309 - 15313 (-)
Gene ID: HRGMv2_1451_58_14
Type: TC
Location: 15670 - 17439 (+)
Gene ID: HRGMv2_1451_58_15
Type: CAZyme
Location: 17506 - 18945 (+)
Gene ID: HRGMv2_1451_58_16
Type: TF
Location: 19212 - 20249 (-)
Gene ID: HRGMv2_1451_58_17
Type: CAZyme
Location: 20591 - 22033 (+)
Gene ID: HRGMv2_1451_58_18
Type: TC
Location: 22210 - 23970 (+)
Gene ID: HRGMv2_1451_58_19
Type: TF
Location: 24383 - 25393 (-)
Gene ID: HRGMv2_1451_58_20
Type: TC
Location: 25669 - 27447 (+)
Gene ID: HRGMv2_1451_58_21
Type: CAZyme
Location: 27523 - 28944 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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