dbCAN Logo

Cluster: HRGMv2_1451_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1451_53 HRGMv2_1451_53_10 13630 15312 + 2.A.66.4.4
pfam HRGMv2_1451_53 HRGMv2_1451_53_11 15319 17259 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1451_53 HRGMv2_1451_53_12 17625 19238 + 3.A.1.5.27
TC HRGMv2_1451_53 HRGMv2_1451_53_13 19396 20352 + 3.A.1.5.38
TC HRGMv2_1451_53 HRGMv2_1451_53_14 20356 22371 + 3.A.1.5.25
TC HRGMv2_1451_53 HRGMv2_1451_53_15 22372 23199 + 3.A.1.5.27
CAZyme HRGMv2_1451_53 HRGMv2_1451_53_16 23331 24257 + CE7
Gene ID: HRGMv2_1451_53_10
Type: TC
Location: 13630 - 15312 (+)
Gene ID: HRGMv2_1451_53_11
Type: pfam
Location: 15319 - 17259 (+)
Gene ID: HRGMv2_1451_53_12
Type: TC
Location: 17625 - 19238 (+)
Gene ID: HRGMv2_1451_53_13
Type: TC
Location: 19396 - 20352 (+)
Gene ID: HRGMv2_1451_53_14
Type: TC
Location: 20356 - 22371 (+)
Gene ID: HRGMv2_1451_53_15
Type: TC
Location: 22372 - 23199 (+)
Gene ID: HRGMv2_1451_53_16
Type: CAZyme
Location: 23331 - 24257 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List