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Cluster: HRGMv2_1451_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1451_4 HRGMv2_1451_4_6 6824 8206 - GH4
TC HRGMv2_1451_4 HRGMv2_1451_4_7 8210 9826 - 4.A.1.1.3
pfam HRGMv2_1451_4 HRGMv2_1451_4_8 9926 10792 - PRD | PRD | CAT_RBD
TC HRGMv2_1451_4 HRGMv2_1451_4_9 10799 11311 - 4.A.1.2.5
STP HRGMv2_1451_4 HRGMv2_1451_4_10 11655 12416 - Fer4
TC HRGMv2_1451_4 HRGMv2_1451_4_11 13038 15287 - 1.I.1.1.3
Gene ID: HRGMv2_1451_4_6
Type: CAZyme
Location: 6824 - 8206 (-)
Gene ID: HRGMv2_1451_4_7
Type: TC
Location: 8210 - 9826 (-)
Gene ID: HRGMv2_1451_4_8
Type: pfam
Location: 9926 - 10792 (-)
Gene ID: HRGMv2_1451_4_9
Type: TC
Location: 10799 - 11311 (-)
Gene ID: HRGMv2_1451_4_10
Type: STP
Location: 11655 - 12416 (-)
Gene ID: HRGMv2_1451_4_11
Type: TC
Location: 13038 - 15287 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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