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Cluster: HRGMv2_1450_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1450_7 HRGMv2_1450_7_196 217883 219241 - 2.A.33.1.1
pfam HRGMv2_1450_7 HRGMv2_1450_7_197 219506 220429 - DHH | DHHA2
pfam HRGMv2_1450_7 HRGMv2_1450_7_198 220596 221549 - ROK
TC HRGMv2_1450_7 HRGMv2_1450_7_199 221791 222123 - 4.A.3.2.3
TC HRGMv2_1450_7 HRGMv2_1450_7_200 222133 222435 - 4.A.3.2.9
TC HRGMv2_1450_7 HRGMv2_1450_7_201 222599 223942 - 4.A.3.2.9
CAZyme HRGMv2_1450_7 HRGMv2_1450_7_202 224063 225463 - GH1
Gene ID: HRGMv2_1450_7_196
Type: TC
Location: 217883 - 219241 (-)
Gene ID: HRGMv2_1450_7_197
Type: pfam
Location: 219506 - 220429 (-)
Gene ID: HRGMv2_1450_7_198
Type: pfam
Location: 220596 - 221549 (-)
Gene ID: HRGMv2_1450_7_199
Type: TC
Location: 221791 - 222123 (-)
Gene ID: HRGMv2_1450_7_200
Type: TC
Location: 222133 - 222435 (-)
Gene ID: HRGMv2_1450_7_201
Type: TC
Location: 222599 - 223942 (-)
Gene ID: HRGMv2_1450_7_202
Type: CAZyme
Location: 224063 - 225463 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1450_7_200 vegan > omnivore 1.07886 0.00701

🧭 Explore Read Mapping of CGC

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