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Cluster: HRGMv2_1450_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1450_7 HRGMv2_1450_7_143 162715 163053 - 4.A.3.1.2
TF HRGMv2_1450_7 HRGMv2_1450_7_144 163268 164272 - LacI
TC HRGMv2_1450_7 HRGMv2_1450_7_145 164630 166399 + 4.A.3.1.1
CAZyme HRGMv2_1450_7 HRGMv2_1450_7_146 166466 167905 + GH1
TF HRGMv2_1450_7 HRGMv2_1450_7_147 168264 169274 - LacI
TC HRGMv2_1450_7 HRGMv2_1450_7_148 169550 171328 + 4.A.3.1.1
CAZyme HRGMv2_1450_7 HRGMv2_1450_7_149 171405 172826 + GH1
Gene ID: HRGMv2_1450_7_143
Type: TC
Location: 162715 - 163053 (-)
Gene ID: HRGMv2_1450_7_144
Type: TF
Location: 163268 - 164272 (-)
Gene ID: HRGMv2_1450_7_145
Type: TC
Location: 164630 - 166399 (+)
Gene ID: HRGMv2_1450_7_146
Type: CAZyme
Location: 166466 - 167905 (+)
Gene ID: HRGMv2_1450_7_147
Type: TF
Location: 168264 - 169274 (-)
Gene ID: HRGMv2_1450_7_148
Type: TC
Location: 169550 - 171328 (+)
Gene ID: HRGMv2_1450_7_149
Type: CAZyme
Location: 171405 - 172826 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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