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Cluster: HRGMv2_1450_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1450_6 HRGMv2_1450_6_68 72723 74129 + CE4
NULL(UNKNOWN) HRGMv2_1450_6 HRGMv2_1450_6_69 74164 74424 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_1450_6 HRGMv2_1450_6_70 74460 76304 + CBS | CBS
TC HRGMv2_1450_6 HRGMv2_1450_6_71 76313 77575 + 2.A.55.3.6
NULL(UNKNOWN) HRGMv2_1450_6 HRGMv2_1450_6_72 77608 77736 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1450_6 HRGMv2_1450_6_73 78029 79348 + Transposase_mut
TC HRGMv2_1450_6 HRGMv2_1450_6_74 79636 81849 - 9.B.97.5.1
Gene ID: HRGMv2_1450_6_68
Type: CAZyme
Location: 72723 - 74129 (+)
Gene ID: HRGMv2_1450_6_69
Type:
Location: 74164 - 74424 (-)
Gene ID: HRGMv2_1450_6_70
Type: STP
Location: 74460 - 76304 (+)
Gene ID: HRGMv2_1450_6_71
Type: TC
Location: 76313 - 77575 (+)
Gene ID: HRGMv2_1450_6_72
Type:
Location: 77608 - 77736 (+)
Gene ID: HRGMv2_1450_6_73
Type: pfam
Location: 78029 - 79348 (+)
Gene ID: HRGMv2_1450_6_74
Type: TC
Location: 79636 - 81849 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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