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Cluster: HRGMv2_1450_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1450_18 HRGMv2_1450_18_77 86231 87736 + GH77
CAZyme HRGMv2_1450_18 HRGMv2_1450_18_78 87865 90132 + GT35
TC HRGMv2_1450_18 HRGMv2_1450_18_79 90588 91787 - 3.A.1.1.22
TC HRGMv2_1450_18 HRGMv2_1450_18_80 91856 92695 - 3.A.1.1.45
TC HRGMv2_1450_18 HRGMv2_1450_18_81 92695 93549 - 3.A.1.1.45
TC HRGMv2_1450_18 HRGMv2_1450_18_82 93637 94953 - 3.A.1.1.45
TF HRGMv2_1450_18 HRGMv2_1450_18_83 95260 95979 - GntR
TC HRGMv2_1450_18 HRGMv2_1450_18_84 96189 98657 + 4.A.1.1.8
Gene ID: HRGMv2_1450_18_77
Type: CAZyme
Location: 86231 - 87736 (+)
Gene ID: HRGMv2_1450_18_78
Type: CAZyme
Location: 87865 - 90132 (+)
Gene ID: HRGMv2_1450_18_79
Type: TC
Location: 90588 - 91787 (-)
Gene ID: HRGMv2_1450_18_80
Type: TC
Location: 91856 - 92695 (-)
Gene ID: HRGMv2_1450_18_81
Type: TC
Location: 92695 - 93549 (-)
Gene ID: HRGMv2_1450_18_82
Type: TC
Location: 93637 - 94953 (-)
Gene ID: HRGMv2_1450_18_83
Type: TF
Location: 95260 - 95979 (-)
Gene ID: HRGMv2_1450_18_84
Type: TC
Location: 96189 - 98657 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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