dbCAN Logo

Cluster: HRGMv2_1450_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1450_3 HRGMv2_1450_3_19 21422 22306 - CE7
TC HRGMv2_1450_3 HRGMv2_1450_3_20 22480 23307 - 3.A.1.5.27
TC HRGMv2_1450_3 HRGMv2_1450_3_21 23308 25323 - 3.A.1.5.25
TC HRGMv2_1450_3 HRGMv2_1450_3_22 25327 26283 - 3.A.1.5.38
TC HRGMv2_1450_3 HRGMv2_1450_3_23 26441 28054 - 3.A.1.5.27
pfam HRGMv2_1450_3 HRGMv2_1450_3_24 28420 30360 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1450_3 HRGMv2_1450_3_25 30367 32049 - 2.A.66.4.4
Gene ID: HRGMv2_1450_3_19
Type: CAZyme
Location: 21422 - 22306 (-)
Gene ID: HRGMv2_1450_3_20
Type: TC
Location: 22480 - 23307 (-)
Gene ID: HRGMv2_1450_3_21
Type: TC
Location: 23308 - 25323 (-)
Gene ID: HRGMv2_1450_3_22
Type: TC
Location: 25327 - 26283 (-)
Gene ID: HRGMv2_1450_3_23
Type: TC
Location: 26441 - 28054 (-)
Gene ID: HRGMv2_1450_3_24
Type: pfam
Location: 28420 - 30360 (-)
Gene ID: HRGMv2_1450_3_25
Type: TC
Location: 30367 - 32049 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List