dbCAN HGM

Cluster: HRGMv2_1449_CGC5

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1449_6	HRGMv2_1449_6_55	58477	59244	-	3.A.1.103.1
TC	HRGMv2_1449_6	HRGMv2_1449_6_56	59257	60102	-	3.A.1.103.6
CAZyme	HRGMv2_1449_6	HRGMv2_1449_6_57	60264	61193	+	GT81
CAZyme	HRGMv2_1449_6	HRGMv2_1449_6_58	61225	63066	-	GT2
pfam	HRGMv2_1449_6	HRGMv2_1449_6_59	63099	64286	-	LicD
CAZyme	HRGMv2_1449_6	HRGMv2_1449_6_60	64386	66221	-	GT2

Gene ID: HRGMv2_1449_6_55
Type: TC
Location: 58477 - 59244 (-)

Gene ID: HRGMv2_1449_6_56
Type: TC
Location: 59257 - 60102 (-)

Gene ID: HRGMv2_1449_6_57
Type: CAZyme
Location: 60264 - 61193 (+)

Gene ID: HRGMv2_1449_6_58
Type: CAZyme
Location: 61225 - 63066 (-)

Gene ID: HRGMv2_1449_6_59
Type: pfam
Location: 63099 - 64286 (-)

Gene ID: HRGMv2_1449_6_60
Type: CAZyme
Location: 64386 - 66221 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1449_6_56	vegan > omnivore	1.59635	0.00701
HRGMv2_1449_6_57	vegan > omnivore	1.58706	0.00701
HRGMv2_1449_6_58	vegan > omnivore	17.49761	0.00701
HRGMv2_1449_6_58	vegetarian > omnivore	12.66602	0.02893
HRGMv2_1449_6_59	vegan > omnivore	17.69433	0.00701
HRGMv2_1449_6_60	vegan > omnivore	10.15306	0.00701