dbCAN Logo

Cluster: HRGMv2_1449_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1449_34 HRGMv2_1449_34_8 8907 10307 + GH1
TC HRGMv2_1449_34 HRGMv2_1449_34_9 10428 11780 + 4.A.3.2.2
pfam HRGMv2_1449_34 HRGMv2_1449_34_10 12048 12236 + PTS_IIB
TC HRGMv2_1449_34 HRGMv2_1449_34_11 12246 12578 + 4.A.3.2.3
STP HRGMv2_1449_34 HRGMv2_1449_34_12 12820 13773 + Glucokinase
pfam HRGMv2_1449_34 HRGMv2_1449_34_13 13940 14863 + DHH | DHHA2
TC HRGMv2_1449_34 HRGMv2_1449_34_14 15131 16489 + 2.A.33.1.1
Gene ID: HRGMv2_1449_34_8
Type: CAZyme
Location: 8907 - 10307 (+)
Gene ID: HRGMv2_1449_34_9
Type: TC
Location: 10428 - 11780 (+)
Gene ID: HRGMv2_1449_34_10
Type: pfam
Location: 12048 - 12236 (+)
Gene ID: HRGMv2_1449_34_11
Type: TC
Location: 12246 - 12578 (+)
Gene ID: HRGMv2_1449_34_12
Type: STP
Location: 12820 - 13773 (+)
Gene ID: HRGMv2_1449_34_13
Type: pfam
Location: 13940 - 14863 (+)
Gene ID: HRGMv2_1449_34_14
Type: TC
Location: 15131 - 16489 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List