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Cluster: HRGMv2_1449_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1449_22 HRGMv2_1449_22_11 15199 17649 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1449_22 HRGMv2_1449_22_12 17671 17790 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1449_22 HRGMv2_1449_22_13 17874 18593 + GntR
TC HRGMv2_1449_22 HRGMv2_1449_22_14 18900 20216 + 3.A.1.1.45
TC HRGMv2_1449_22 HRGMv2_1449_22_15 20304 21158 + 3.A.1.1.45
TC HRGMv2_1449_22 HRGMv2_1449_22_16 21158 21997 + 3.A.1.1.45
TC HRGMv2_1449_22 HRGMv2_1449_22_17 22066 23265 + 3.A.1.1.22
CAZyme HRGMv2_1449_22 HRGMv2_1449_22_18 23724 25991 - GT35
CAZyme HRGMv2_1449_22 HRGMv2_1449_22_19 26119 27624 - GH77
Gene ID: HRGMv2_1449_22_11
Type: TC
Location: 15199 - 17649 (-)
Gene ID: HRGMv2_1449_22_12
Type:
Location: 17671 - 17790 (+)
Gene ID: HRGMv2_1449_22_13
Type: TF
Location: 17874 - 18593 (+)
Gene ID: HRGMv2_1449_22_14
Type: TC
Location: 18900 - 20216 (+)
Gene ID: HRGMv2_1449_22_15
Type: TC
Location: 20304 - 21158 (+)
Gene ID: HRGMv2_1449_22_16
Type: TC
Location: 21158 - 21997 (+)
Gene ID: HRGMv2_1449_22_17
Type: TC
Location: 22066 - 23265 (+)
Gene ID: HRGMv2_1449_22_18
Type: CAZyme
Location: 23724 - 25991 (-)
Gene ID: HRGMv2_1449_22_19
Type: CAZyme
Location: 26119 - 27624 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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