dbCAN Logo

Cluster: HRGMv2_1449_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1449_16 HRGMv2_1449_16_10 13655 15958 + 2.A.66.4.4
pfam HRGMv2_1449_16 HRGMv2_1449_16_11 15965 17905 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1449_16 HRGMv2_1449_16_12 18271 19884 + 3.A.1.5.27
TC HRGMv2_1449_16 HRGMv2_1449_16_13 20042 20998 + 3.A.1.5.38
TC HRGMv2_1449_16 HRGMv2_1449_16_14 21002 23017 + 3.A.1.5.25
TC HRGMv2_1449_16 HRGMv2_1449_16_15 23018 23845 + 3.A.1.5.27
CAZyme HRGMv2_1449_16 HRGMv2_1449_16_16 24019 24903 + CE7
Gene ID: HRGMv2_1449_16_10
Type: TC
Location: 13655 - 15958 (+)
Gene ID: HRGMv2_1449_16_11
Type: pfam
Location: 15965 - 17905 (+)
Gene ID: HRGMv2_1449_16_12
Type: TC
Location: 18271 - 19884 (+)
Gene ID: HRGMv2_1449_16_13
Type: TC
Location: 20042 - 20998 (+)
Gene ID: HRGMv2_1449_16_14
Type: TC
Location: 21002 - 23017 (+)
Gene ID: HRGMv2_1449_16_15
Type: TC
Location: 23018 - 23845 (+)
Gene ID: HRGMv2_1449_16_16
Type: CAZyme
Location: 24019 - 24903 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List