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Cluster: HRGMv2_1447_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1447_135 HRGMv2_1447_135_1 207 545 - 4.A.3.1.2
TF HRGMv2_1447_135 HRGMv2_1447_135_2 760 1764 - LacI
TC HRGMv2_1447_135 HRGMv2_1447_135_3 2121 3896 + 4.A.3.1.1
CAZyme HRGMv2_1447_135 HRGMv2_1447_135_4 3963 5402 + GH1
TF HRGMv2_1447_135 HRGMv2_1447_135_5 5760 6770 - LacI
TC HRGMv2_1447_135 HRGMv2_1447_135_6 7023 8801 + 4.A.3.1.1
CAZyme HRGMv2_1447_135 HRGMv2_1447_135_7 8877 9365 + GH1
Gene ID: HRGMv2_1447_135_1
Type: TC
Location: 207 - 545 (-)
Gene ID: HRGMv2_1447_135_2
Type: TF
Location: 760 - 1764 (-)
Gene ID: HRGMv2_1447_135_3
Type: TC
Location: 2121 - 3896 (+)
Gene ID: HRGMv2_1447_135_4
Type: CAZyme
Location: 3963 - 5402 (+)
Gene ID: HRGMv2_1447_135_5
Type: TF
Location: 5760 - 6770 (-)
Gene ID: HRGMv2_1447_135_6
Type: TC
Location: 7023 - 8801 (+)
Gene ID: HRGMv2_1447_135_7
Type: CAZyme
Location: 8877 - 9365 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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