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Cluster: HRGMv2_1447_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1447_106 HRGMv2_1447_106_13 11627 12796 - CE9
STP HRGMv2_1447_106 HRGMv2_1447_106_14 12914 14080 - SIS | SIS
TF HRGMv2_1447_106 HRGMv2_1447_106_15 14195 14926 - GntR
TC HRGMv2_1447_106 HRGMv2_1447_106_16 15112 16194 - 4.A.6.1.4
TC HRGMv2_1447_106 HRGMv2_1447_106_17 16184 16984 - 4.A.6.1.4
TC HRGMv2_1447_106 HRGMv2_1447_106_18 17075 17557 - 4.A.6.1.4
pfam HRGMv2_1447_106 HRGMv2_1447_106_19 17594 17875 - YajC
TC HRGMv2_1447_106 HRGMv2_1447_106_20 17875 18318 - 4.A.6.1.16
Gene ID: HRGMv2_1447_106_13
Type: CAZyme
Location: 11627 - 12796 (-)
Gene ID: HRGMv2_1447_106_14
Type: STP
Location: 12914 - 14080 (-)
Gene ID: HRGMv2_1447_106_15
Type: TF
Location: 14195 - 14926 (-)
Gene ID: HRGMv2_1447_106_16
Type: TC
Location: 15112 - 16194 (-)
Gene ID: HRGMv2_1447_106_17
Type: TC
Location: 16184 - 16984 (-)
Gene ID: HRGMv2_1447_106_18
Type: TC
Location: 17075 - 17557 (-)
Gene ID: HRGMv2_1447_106_19
Type: pfam
Location: 17594 - 17875 (-)
Gene ID: HRGMv2_1447_106_20
Type: TC
Location: 17875 - 18318 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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