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Cluster: HRGMv2_1447_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1447_182 HRGMv2_1447_182_8 19704 21131 - GH140
CAZyme HRGMv2_1447_182 HRGMv2_1447_182_9 21201 22445 - GH1
pfam HRGMv2_1447_182 HRGMv2_1447_182_10 22538 23293 - YdjC
TF HRGMv2_1447_182 HRGMv2_1447_182_11 23524 25422 + HTH_11
CAZyme HRGMv2_1447_182 HRGMv2_1447_182_12 25438 26850 + GH1
pfam HRGMv2_1447_182 HRGMv2_1447_182_13 26947 27306 + PTS_IIA
TC HRGMv2_1447_182 HRGMv2_1447_182_14 27561 28823 - 4.A.3.2.2
TC HRGMv2_1447_182 HRGMv2_1447_182_15 28838 29140 - 4.A.3.2.6
Gene ID: HRGMv2_1447_182_8
Type: CAZyme
Location: 19704 - 21131 (-)
Gene ID: HRGMv2_1447_182_9
Type: CAZyme
Location: 21201 - 22445 (-)
Gene ID: HRGMv2_1447_182_10
Type: pfam
Location: 22538 - 23293 (-)
Gene ID: HRGMv2_1447_182_11
Type: TF
Location: 23524 - 25422 (+)
Gene ID: HRGMv2_1447_182_12
Type: CAZyme
Location: 25438 - 26850 (+)
Gene ID: HRGMv2_1447_182_13
Type: pfam
Location: 26947 - 27306 (+)
Gene ID: HRGMv2_1447_182_14
Type: TC
Location: 27561 - 28823 (-)
Gene ID: HRGMv2_1447_182_15
Type: TC
Location: 28838 - 29140 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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