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Cluster: HRGMv2_1447_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1447_138 HRGMv2_1447_138_4 5383 7065 + 2.A.66.4.4
pfam HRGMv2_1447_138 HRGMv2_1447_138_5 7072 9012 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1447_138 HRGMv2_1447_138_6 9378 10991 + 3.A.1.5.27
TC HRGMv2_1447_138 HRGMv2_1447_138_7 11149 12105 + 3.A.1.5.38
TC HRGMv2_1447_138 HRGMv2_1447_138_8 12109 14124 + 3.A.1.5.25
TC HRGMv2_1447_138 HRGMv2_1447_138_9 14125 14952 + 3.A.1.5.27
CAZyme HRGMv2_1447_138 HRGMv2_1447_138_10 15126 16010 + CE7
Gene ID: HRGMv2_1447_138_4
Type: TC
Location: 5383 - 7065 (+)
Gene ID: HRGMv2_1447_138_5
Type: pfam
Location: 7072 - 9012 (+)
Gene ID: HRGMv2_1447_138_6
Type: TC
Location: 9378 - 10991 (+)
Gene ID: HRGMv2_1447_138_7
Type: TC
Location: 11149 - 12105 (+)
Gene ID: HRGMv2_1447_138_8
Type: TC
Location: 12109 - 14124 (+)
Gene ID: HRGMv2_1447_138_9
Type: TC
Location: 14125 - 14952 (+)
Gene ID: HRGMv2_1447_138_10
Type: CAZyme
Location: 15126 - 16010 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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