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Cluster: HRGMv2_1446_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1446_25 HRGMv2_1446_25_6 7980 9233 + GH77
CAZyme HRGMv2_1446_25 HRGMv2_1446_25_7 9362 11629 + GT35
TC HRGMv2_1446_25 HRGMv2_1446_25_8 12085 13284 - 3.A.1.1.22
TC HRGMv2_1446_25 HRGMv2_1446_25_9 13353 14192 - 3.A.1.1.45
TC HRGMv2_1446_25 HRGMv2_1446_25_10 14192 15046 - 3.A.1.1.45
TC HRGMv2_1446_25 HRGMv2_1446_25_11 15134 16450 - 3.A.1.1.45
TF HRGMv2_1446_25 HRGMv2_1446_25_12 16757 17476 - GntR
NULL(UNKNOWN) HRGMv2_1446_25 HRGMv2_1446_25_13 17560 17679 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1446_25 HRGMv2_1446_25_14 17701 20151 + 4.A.1.1.8
Gene ID: HRGMv2_1446_25_6
Type: CAZyme
Location: 7980 - 9233 (+)
Gene ID: HRGMv2_1446_25_7
Type: CAZyme
Location: 9362 - 11629 (+)
Gene ID: HRGMv2_1446_25_8
Type: TC
Location: 12085 - 13284 (-)
Gene ID: HRGMv2_1446_25_9
Type: TC
Location: 13353 - 14192 (-)
Gene ID: HRGMv2_1446_25_10
Type: TC
Location: 14192 - 15046 (-)
Gene ID: HRGMv2_1446_25_11
Type: TC
Location: 15134 - 16450 (-)
Gene ID: HRGMv2_1446_25_12
Type: TF
Location: 16757 - 17476 (-)
Gene ID: HRGMv2_1446_25_13
Type:
Location: 17560 - 17679 (-)
Gene ID: HRGMv2_1446_25_14
Type: TC
Location: 17701 - 20151 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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