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Cluster: HRGMv2_1446_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1446_14 HRGMv2_1446_14_20 21334 22260 - CE7
TC HRGMv2_1446_14 HRGMv2_1446_14_21 22392 23219 - 3.A.1.5.27
TC HRGMv2_1446_14 HRGMv2_1446_14_22 23220 25235 - 3.A.1.5.25
TC HRGMv2_1446_14 HRGMv2_1446_14_23 25239 26195 - 3.A.1.5.38
TC HRGMv2_1446_14 HRGMv2_1446_14_24 26353 27966 - 3.A.1.5.27
pfam HRGMv2_1446_14 HRGMv2_1446_14_25 28332 30272 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1446_14 HRGMv2_1446_14_26 30279 31961 - 2.A.66.4.4
Gene ID: HRGMv2_1446_14_20
Type: CAZyme
Location: 21334 - 22260 (-)
Gene ID: HRGMv2_1446_14_21
Type: TC
Location: 22392 - 23219 (-)
Gene ID: HRGMv2_1446_14_22
Type: TC
Location: 23220 - 25235 (-)
Gene ID: HRGMv2_1446_14_23
Type: TC
Location: 25239 - 26195 (-)
Gene ID: HRGMv2_1446_14_24
Type: TC
Location: 26353 - 27966 (-)
Gene ID: HRGMv2_1446_14_25
Type: pfam
Location: 28332 - 30272 (-)
Gene ID: HRGMv2_1446_14_26
Type: TC
Location: 30279 - 31961 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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