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Cluster: HRGMv2_1445_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1445_13 HRGMv2_1445_13_13 10818 11300 + 4.A.6.1.5
sulfatase HRGMv2_1445_13 HRGMv2_1445_13_14 11627 12679 - S1_4
TF HRGMv2_1445_13 HRGMv2_1445_13_15 12886 13650 + HTH_DeoR
CAZyme HRGMv2_1445_13 HRGMv2_1445_13_16 14159 15580 - GH1
TC HRGMv2_1445_13 HRGMv2_1445_13_17 15656 17335 - 4.A.3.1.1
TC HRGMv2_1445_13 HRGMv2_1445_13_18 17296 17433 - 4.A.3.1.1
TF HRGMv2_1445_13 HRGMv2_1445_13_19 17710 18720 + LacI
CAZyme HRGMv2_1445_13 HRGMv2_1445_13_20 18904 20343 - GH1
TC HRGMv2_1445_13 HRGMv2_1445_13_21 20414 21085 - 4.A.3.1.1
TC HRGMv2_1445_13 HRGMv2_1445_13_22 21082 22191 - 4.A.3.1.1
TF HRGMv2_1445_13 HRGMv2_1445_13_23 22548 23552 + LacI
TC HRGMv2_1445_13 HRGMv2_1445_13_24 23767 24105 + 4.A.3.1.2
Gene ID: HRGMv2_1445_13_13
Type: TC
Location: 10818 - 11300 (+)
Gene ID: HRGMv2_1445_13_14
Type: sulfatase
Location: 11627 - 12679 (-)
Gene ID: HRGMv2_1445_13_15
Type: TF
Location: 12886 - 13650 (+)
Gene ID: HRGMv2_1445_13_16
Type: CAZyme
Location: 14159 - 15580 (-)
Gene ID: HRGMv2_1445_13_17
Type: TC
Location: 15656 - 17335 (-)
Gene ID: HRGMv2_1445_13_18
Type: TC
Location: 17296 - 17433 (-)
Gene ID: HRGMv2_1445_13_19
Type: TF
Location: 17710 - 18720 (+)
Gene ID: HRGMv2_1445_13_20
Type: CAZyme
Location: 18904 - 20343 (-)
Gene ID: HRGMv2_1445_13_21
Type: TC
Location: 20414 - 21085 (-)
Gene ID: HRGMv2_1445_13_22
Type: TC
Location: 21082 - 22191 (-)
Gene ID: HRGMv2_1445_13_23
Type: TF
Location: 22548 - 23552 (+)
Gene ID: HRGMv2_1445_13_24
Type: TC
Location: 23767 - 24105 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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