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Cluster: HRGMv2_1445_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1445_9 HRGMv2_1445_9_10 13588 15891 + 2.A.66.4.4
pfam HRGMv2_1445_9 HRGMv2_1445_9_11 15898 17838 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1445_9 HRGMv2_1445_9_12 18204 19817 + 3.A.1.5.27
TC HRGMv2_1445_9 HRGMv2_1445_9_13 19975 20931 + 3.A.1.5.38
TC HRGMv2_1445_9 HRGMv2_1445_9_14 20935 22950 + 3.A.1.5.25
TC HRGMv2_1445_9 HRGMv2_1445_9_15 22951 23778 + 3.A.1.5.27
CAZyme HRGMv2_1445_9 HRGMv2_1445_9_16 23910 24836 + CE7
Gene ID: HRGMv2_1445_9_10
Type: TC
Location: 13588 - 15891 (+)
Gene ID: HRGMv2_1445_9_11
Type: pfam
Location: 15898 - 17838 (+)
Gene ID: HRGMv2_1445_9_12
Type: TC
Location: 18204 - 19817 (+)
Gene ID: HRGMv2_1445_9_13
Type: TC
Location: 19975 - 20931 (+)
Gene ID: HRGMv2_1445_9_14
Type: TC
Location: 20935 - 22950 (+)
Gene ID: HRGMv2_1445_9_15
Type: TC
Location: 22951 - 23778 (+)
Gene ID: HRGMv2_1445_9_16
Type: CAZyme
Location: 23910 - 24836 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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