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Cluster: HRGMv2_1445_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1445_46 HRGMv2_1445_46_1 1 1407 + 3.A.1.1.45
TC HRGMv2_1445_46 HRGMv2_1445_46_2 1495 2349 + 3.A.1.1.45
TC HRGMv2_1445_46 HRGMv2_1445_46_3 2349 3188 + 3.A.1.1.45
TC HRGMv2_1445_46 HRGMv2_1445_46_4 3257 4456 + 3.A.1.1.22
CAZyme HRGMv2_1445_46 HRGMv2_1445_46_5 4913 7180 - GT35
CAZyme HRGMv2_1445_46 HRGMv2_1445_46_6 7309 8814 - GH77
Gene ID: HRGMv2_1445_46_1
Type: TC
Location: 1 - 1407 (+)
Gene ID: HRGMv2_1445_46_2
Type: TC
Location: 1495 - 2349 (+)
Gene ID: HRGMv2_1445_46_3
Type: TC
Location: 2349 - 3188 (+)
Gene ID: HRGMv2_1445_46_4
Type: TC
Location: 3257 - 4456 (+)
Gene ID: HRGMv2_1445_46_5
Type: CAZyme
Location: 4913 - 7180 (-)
Gene ID: HRGMv2_1445_46_6
Type: CAZyme
Location: 7309 - 8814 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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