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Cluster: HRGMv2_1445_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1445_24 HRGMv2_1445_24_14 16878 18260 - GH4
TC HRGMv2_1445_24 HRGMv2_1445_24_15 18264 19880 - 4.A.1.1.3
pfam HRGMv2_1445_24 HRGMv2_1445_24_16 19980 20846 - PRD | PRD | CAT_RBD
TC HRGMv2_1445_24 HRGMv2_1445_24_17 20853 21365 - 4.A.1.2.11
TC HRGMv2_1445_24 HRGMv2_1445_24_18 21712 23886 - 1.I.1.1.3
TC HRGMv2_1445_24 HRGMv2_1445_24_19 24447 26792 + 3.A.3.5.15
Gene ID: HRGMv2_1445_24_14
Type: CAZyme
Location: 16878 - 18260 (-)
Gene ID: HRGMv2_1445_24_15
Type: TC
Location: 18264 - 19880 (-)
Gene ID: HRGMv2_1445_24_16
Type: pfam
Location: 19980 - 20846 (-)
Gene ID: HRGMv2_1445_24_17
Type: TC
Location: 20853 - 21365 (-)
Gene ID: HRGMv2_1445_24_18
Type: TC
Location: 21712 - 23886 (-)
Gene ID: HRGMv2_1445_24_19
Type: TC
Location: 24447 - 26792 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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