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Cluster: HRGMv2_1444_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1444_17 HRGMv2_1444_17_18 19948 20874 - CE7
TC HRGMv2_1444_17 HRGMv2_1444_17_19 21006 21833 - 3.A.1.5.27
TC HRGMv2_1444_17 HRGMv2_1444_17_20 21834 23849 - 3.A.1.5.25
TC HRGMv2_1444_17 HRGMv2_1444_17_21 23853 24809 - 3.A.1.5.38
TC HRGMv2_1444_17 HRGMv2_1444_17_22 24967 26580 - 3.A.1.5.27
pfam HRGMv2_1444_17 HRGMv2_1444_17_23 26946 28886 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1444_17 HRGMv2_1444_17_24 28893 30575 - 2.A.66.4.4
Gene ID: HRGMv2_1444_17_18
Type: CAZyme
Location: 19948 - 20874 (-)
Gene ID: HRGMv2_1444_17_19
Type: TC
Location: 21006 - 21833 (-)
Gene ID: HRGMv2_1444_17_20
Type: TC
Location: 21834 - 23849 (-)
Gene ID: HRGMv2_1444_17_21
Type: TC
Location: 23853 - 24809 (-)
Gene ID: HRGMv2_1444_17_22
Type: TC
Location: 24967 - 26580 (-)
Gene ID: HRGMv2_1444_17_23
Type: pfam
Location: 26946 - 28886 (-)
Gene ID: HRGMv2_1444_17_24
Type: TC
Location: 28893 - 30575 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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