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Cluster: HRGMv2_1444_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1444_4 HRGMv2_1444_4_53 70555 72963 - 9.B.144.1.5
CAZyme HRGMv2_1444_4 HRGMv2_1444_4_54 72947 73915 - GT2
CAZyme HRGMv2_1444_4 HRGMv2_1444_4_55 73922 74893 - GT81
TC HRGMv2_1444_4 HRGMv2_1444_4_56 75054 75899 + 3.A.1.103.6
TC HRGMv2_1444_4 HRGMv2_1444_4_57 75911 76678 + 3.A.1.103.1
TC HRGMv2_1444_4 HRGMv2_1444_4_58 76885 77871 + 9.B.97.6.3
Gene ID: HRGMv2_1444_4_53
Type: TC
Location: 70555 - 72963 (-)
Gene ID: HRGMv2_1444_4_54
Type: CAZyme
Location: 72947 - 73915 (-)
Gene ID: HRGMv2_1444_4_55
Type: CAZyme
Location: 73922 - 74893 (-)
Gene ID: HRGMv2_1444_4_56
Type: TC
Location: 75054 - 75899 (+)
Gene ID: HRGMv2_1444_4_57
Type: TC
Location: 75911 - 76678 (+)
Gene ID: HRGMv2_1444_4_58
Type: TC
Location: 76885 - 77871 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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