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Cluster: HRGMv2_1444_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1444_2 HRGMv2_1444_2_19 21941 23029 - 3.D.1.4.2
pfam HRGMv2_1444_2 HRGMv2_1444_2_20 23035 23754 - Complex1_30kDa
TC HRGMv2_1444_2 HRGMv2_1444_2_21 23754 24335 - 3.D.1.4.2
TC HRGMv2_1444_2 HRGMv2_1444_2_22 24348 27230 - 3.D.1.4.2
TF HRGMv2_1444_2 HRGMv2_1444_2_23 27509 27913 - 0039939
STP HRGMv2_1444_2 HRGMv2_1444_2_24 28363 30393 - Pyr_redox_2
TC HRGMv2_1444_2 HRGMv2_1444_2_25 31348 32910 + 4.A.1.1.16
NULL(UNKNOWN) HRGMv2_1444_2 HRGMv2_1444_2_26 32956 33225 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1444_2 HRGMv2_1444_2_27 33245 34573 + GH4
Gene ID: HRGMv2_1444_2_19
Type: TC
Location: 21941 - 23029 (-)
Gene ID: HRGMv2_1444_2_20
Type: pfam
Location: 23035 - 23754 (-)
Gene ID: HRGMv2_1444_2_21
Type: TC
Location: 23754 - 24335 (-)
Gene ID: HRGMv2_1444_2_22
Type: TC
Location: 24348 - 27230 (-)
Gene ID: HRGMv2_1444_2_23
Type: TF
Location: 27509 - 27913 (-)
Gene ID: HRGMv2_1444_2_24
Type: STP
Location: 28363 - 30393 (-)
Gene ID: HRGMv2_1444_2_25
Type: TC
Location: 31348 - 32910 (+)
Gene ID: HRGMv2_1444_2_26
Type:
Location: 32956 - 33225 (+)
Gene ID: HRGMv2_1444_2_27
Type: CAZyme
Location: 33245 - 34573 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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