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Cluster: HRGMv2_1443_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1443_4 HRGMv2_1443_4_25 30382 32058 + 3.A.1.5.35
TC HRGMv2_1443_4 HRGMv2_1443_4_26 32215 33252 + 3.A.1.5.37
TC HRGMv2_1443_4 HRGMv2_1443_4_27 33267 34202 + 3.A.1.5.11
TC HRGMv2_1443_4 HRGMv2_1443_4_28 34205 35296 + 3.A.1.5.34
TC HRGMv2_1443_4 HRGMv2_1443_4_29 35296 36324 + 3.A.1.5.36
STP HRGMv2_1443_4 HRGMv2_1443_4_30 37066 39411 + GAF | SpoIIE
STP HRGMv2_1443_4 HRGMv2_1443_4_31 39490 40236 + STAS
CAZyme HRGMv2_1443_4 HRGMv2_1443_4_32 40890 42713 + GH13_30
Gene ID: HRGMv2_1443_4_25
Type: TC
Location: 30382 - 32058 (+)
Gene ID: HRGMv2_1443_4_26
Type: TC
Location: 32215 - 33252 (+)
Gene ID: HRGMv2_1443_4_27
Type: TC
Location: 33267 - 34202 (+)
Gene ID: HRGMv2_1443_4_28
Type: TC
Location: 34205 - 35296 (+)
Gene ID: HRGMv2_1443_4_29
Type: TC
Location: 35296 - 36324 (+)
Gene ID: HRGMv2_1443_4_30
Type: STP
Location: 37066 - 39411 (+)
Gene ID: HRGMv2_1443_4_31
Type: STP
Location: 39490 - 40236 (+)
Gene ID: HRGMv2_1443_4_32
Type: CAZyme
Location: 40890 - 42713 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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