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Cluster: HRGMv2_1443_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1443_22 HRGMv2_1443_22_81 108990 110372 - GH4
TC HRGMv2_1443_22 HRGMv2_1443_22_82 110376 111992 - 4.A.1.1.3
pfam HRGMv2_1443_22 HRGMv2_1443_22_83 112092 112958 - PRD | PRD | CAT_RBD
TC HRGMv2_1443_22 HRGMv2_1443_22_84 112965 113477 - 4.A.1.2.11
TC HRGMv2_1443_22 HRGMv2_1443_22_85 113956 116193 - 1.I.1.1.3
TC HRGMv2_1443_22 HRGMv2_1443_22_86 116746 119088 + 3.A.3.5.15
Gene ID: HRGMv2_1443_22_81
Type: CAZyme
Location: 108990 - 110372 (-)
Gene ID: HRGMv2_1443_22_82
Type: TC
Location: 110376 - 111992 (-)
Gene ID: HRGMv2_1443_22_83
Type: pfam
Location: 112092 - 112958 (-)
Gene ID: HRGMv2_1443_22_84
Type: TC
Location: 112965 - 113477 (-)
Gene ID: HRGMv2_1443_22_85
Type: TC
Location: 113956 - 116193 (-)
Gene ID: HRGMv2_1443_22_86
Type: TC
Location: 116746 - 119088 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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