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Cluster: HRGMv2_1443_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1443_20 HRGMv2_1443_20_44 56286 57686 + GH1
TC HRGMv2_1443_20 HRGMv2_1443_20_45 57807 59159 + 4.A.3.2.2
TC HRGMv2_1443_20 HRGMv2_1443_20_46 59313 59615 + 4.A.3.2.9
TC HRGMv2_1443_20 HRGMv2_1443_20_47 59625 59957 + 4.A.3.2.3
STP HRGMv2_1443_20 HRGMv2_1443_20_48 60199 61152 + Glucokinase
pfam HRGMv2_1443_20 HRGMv2_1443_20_49 61318 62241 + DHH | DHHA2
TC HRGMv2_1443_20 HRGMv2_1443_20_50 62509 63867 + 2.A.33.1.1
Gene ID: HRGMv2_1443_20_44
Type: CAZyme
Location: 56286 - 57686 (+)
Gene ID: HRGMv2_1443_20_45
Type: TC
Location: 57807 - 59159 (+)
Gene ID: HRGMv2_1443_20_46
Type: TC
Location: 59313 - 59615 (+)
Gene ID: HRGMv2_1443_20_47
Type: TC
Location: 59625 - 59957 (+)
Gene ID: HRGMv2_1443_20_48
Type: STP
Location: 60199 - 61152 (+)
Gene ID: HRGMv2_1443_20_49
Type: pfam
Location: 61318 - 62241 (+)
Gene ID: HRGMv2_1443_20_50
Type: TC
Location: 62509 - 63867 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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