dbCAN Logo

Cluster: HRGMv2_1443_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1443_19 HRGMv2_1443_19_50 62245 62583 - 4.A.3.1.2
TF HRGMv2_1443_19 HRGMv2_1443_19_51 62798 63832 - LacI
TC HRGMv2_1443_19 HRGMv2_1443_19_52 64160 65935 + 4.A.3.1.1
CAZyme HRGMv2_1443_19 HRGMv2_1443_19_53 66002 67441 + GH1
TF HRGMv2_1443_19 HRGMv2_1443_19_54 67800 68810 - LacI
TC HRGMv2_1443_19 HRGMv2_1443_19_55 69086 70864 + 4.A.3.1.1
CAZyme HRGMv2_1443_19 HRGMv2_1443_19_56 70940 72361 + GH1
TF HRGMv2_1443_19 HRGMv2_1443_19_57 72558 73322 - HTH_DeoR
sulfatase HRGMv2_1443_19 HRGMv2_1443_19_58 73529 74581 + S1_4
TC HRGMv2_1443_19 HRGMv2_1443_19_59 74908 75390 - 4.A.6.1.5
Gene ID: HRGMv2_1443_19_50
Type: TC
Location: 62245 - 62583 (-)
Gene ID: HRGMv2_1443_19_51
Type: TF
Location: 62798 - 63832 (-)
Gene ID: HRGMv2_1443_19_52
Type: TC
Location: 64160 - 65935 (+)
Gene ID: HRGMv2_1443_19_53
Type: CAZyme
Location: 66002 - 67441 (+)
Gene ID: HRGMv2_1443_19_54
Type: TF
Location: 67800 - 68810 (-)
Gene ID: HRGMv2_1443_19_55
Type: TC
Location: 69086 - 70864 (+)
Gene ID: HRGMv2_1443_19_56
Type: CAZyme
Location: 70940 - 72361 (+)
Gene ID: HRGMv2_1443_19_57
Type: TF
Location: 72558 - 73322 (-)
Gene ID: HRGMv2_1443_19_58
Type: sulfatase
Location: 73529 - 74581 (+)
Gene ID: HRGMv2_1443_19_59
Type: TC
Location: 74908 - 75390 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List