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Cluster: HRGMv2_1443_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1443_11 HRGMv2_1443_11_14 15430 17880 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1443_11 HRGMv2_1443_11_15 17902 18021 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1443_11 HRGMv2_1443_11_16 18105 18824 + GntR
TC HRGMv2_1443_11 HRGMv2_1443_11_17 19131 20447 + 3.A.1.1.45
TC HRGMv2_1443_11 HRGMv2_1443_11_18 20535 21389 + 3.A.1.1.45
TC HRGMv2_1443_11 HRGMv2_1443_11_19 21389 22228 + 3.A.1.1.45
TC HRGMv2_1443_11 HRGMv2_1443_11_20 22297 23496 + 3.A.1.1.22
CAZyme HRGMv2_1443_11 HRGMv2_1443_11_21 24033 26300 - GT35
CAZyme HRGMv2_1443_11 HRGMv2_1443_11_22 26429 27934 - GH77
Gene ID: HRGMv2_1443_11_14
Type: TC
Location: 15430 - 17880 (-)
Gene ID: HRGMv2_1443_11_15
Type:
Location: 17902 - 18021 (+)
Gene ID: HRGMv2_1443_11_16
Type: TF
Location: 18105 - 18824 (+)
Gene ID: HRGMv2_1443_11_17
Type: TC
Location: 19131 - 20447 (+)
Gene ID: HRGMv2_1443_11_18
Type: TC
Location: 20535 - 21389 (+)
Gene ID: HRGMv2_1443_11_19
Type: TC
Location: 21389 - 22228 (+)
Gene ID: HRGMv2_1443_11_20
Type: TC
Location: 22297 - 23496 (+)
Gene ID: HRGMv2_1443_11_21
Type: CAZyme
Location: 24033 - 26300 (-)
Gene ID: HRGMv2_1443_11_22
Type: CAZyme
Location: 26429 - 27934 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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