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Cluster: HRGMv2_1442_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1442_10 HRGMv2_1442_10_10 13586 15268 + 2.A.66.4.4
pfam HRGMv2_1442_10 HRGMv2_1442_10_11 15275 17215 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1442_10 HRGMv2_1442_10_12 17581 19194 + 3.A.1.5.27
TC HRGMv2_1442_10 HRGMv2_1442_10_13 19352 20308 + 3.A.1.5.38
TC HRGMv2_1442_10 HRGMv2_1442_10_14 20312 22327 + 3.A.1.5.25
TC HRGMv2_1442_10 HRGMv2_1442_10_15 22328 23155 + 3.A.1.5.27
CAZyme HRGMv2_1442_10 HRGMv2_1442_10_16 23287 24213 + CE7
Gene ID: HRGMv2_1442_10_10
Type: TC
Location: 13586 - 15268 (+)
Gene ID: HRGMv2_1442_10_11
Type: pfam
Location: 15275 - 17215 (+)
Gene ID: HRGMv2_1442_10_12
Type: TC
Location: 17581 - 19194 (+)
Gene ID: HRGMv2_1442_10_13
Type: TC
Location: 19352 - 20308 (+)
Gene ID: HRGMv2_1442_10_14
Type: TC
Location: 20312 - 22327 (+)
Gene ID: HRGMv2_1442_10_15
Type: TC
Location: 22328 - 23155 (+)
Gene ID: HRGMv2_1442_10_16
Type: CAZyme
Location: 23287 - 24213 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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