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Cluster: HRGMv2_1441_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1441_30 HRGMv2_1441_30_29 39076 40458 - GH4
TC HRGMv2_1441_30 HRGMv2_1441_30_30 40462 42078 - 4.A.1.1.3
pfam HRGMv2_1441_30 HRGMv2_1441_30_31 42178 43044 - PRD | PRD | CAT_RBD
TC HRGMv2_1441_30 HRGMv2_1441_30_32 43051 43563 - 4.A.1.2.5
STP HRGMv2_1441_30 HRGMv2_1441_30_33 43907 44668 - Fer4
NULL(UNKNOWN) HRGMv2_1441_30 HRGMv2_1441_30_34 45293 45586 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1441_30 HRGMv2_1441_30_35 45537 47561 - 1.I.1.1.3
STP HRGMv2_1441_30 HRGMv2_1441_30_36 48151 49113 + FHA
STP HRGMv2_1441_30 HRGMv2_1441_30_37 49285 51369 + Pkinase
TC HRGMv2_1441_30 HRGMv2_1441_30_38 51860 54199 + 3.A.3.5.15
Gene ID: HRGMv2_1441_30_29
Type: CAZyme
Location: 39076 - 40458 (-)
Gene ID: HRGMv2_1441_30_30
Type: TC
Location: 40462 - 42078 (-)
Gene ID: HRGMv2_1441_30_31
Type: pfam
Location: 42178 - 43044 (-)
Gene ID: HRGMv2_1441_30_32
Type: TC
Location: 43051 - 43563 (-)
Gene ID: HRGMv2_1441_30_33
Type: STP
Location: 43907 - 44668 (-)
Gene ID: HRGMv2_1441_30_34
Type:
Location: 45293 - 45586 (-)
Gene ID: HRGMv2_1441_30_35
Type: TC
Location: 45537 - 47561 (-)
Gene ID: HRGMv2_1441_30_36
Type: STP
Location: 48151 - 49113 (+)
Gene ID: HRGMv2_1441_30_37
Type: STP
Location: 49285 - 51369 (+)
Gene ID: HRGMv2_1441_30_38
Type: TC
Location: 51860 - 54199 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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