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Cluster: HRGMv2_1441_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1441_69 HRGMv2_1441_69_167 180111 181616 + GH77
CAZyme HRGMv2_1441_69 HRGMv2_1441_69_168 181745 184012 + GT35
TC HRGMv2_1441_69 HRGMv2_1441_69_169 184469 185668 - 3.A.1.1.22
TC HRGMv2_1441_69 HRGMv2_1441_69_170 185737 186576 - 3.A.1.1.45
TC HRGMv2_1441_69 HRGMv2_1441_69_171 186576 187430 - 3.A.1.1.45
TC HRGMv2_1441_69 HRGMv2_1441_69_172 187518 188834 - 3.A.1.1.45
TF HRGMv2_1441_69 HRGMv2_1441_69_173 189129 189848 - GntR
TC HRGMv2_1441_69 HRGMv2_1441_69_174 190076 192529 + 4.A.1.1.8
Gene ID: HRGMv2_1441_69_167
Type: CAZyme
Location: 180111 - 181616 (+)
Gene ID: HRGMv2_1441_69_168
Type: CAZyme
Location: 181745 - 184012 (+)
Gene ID: HRGMv2_1441_69_169
Type: TC
Location: 184469 - 185668 (-)
Gene ID: HRGMv2_1441_69_170
Type: TC
Location: 185737 - 186576 (-)
Gene ID: HRGMv2_1441_69_171
Type: TC
Location: 186576 - 187430 (-)
Gene ID: HRGMv2_1441_69_172
Type: TC
Location: 187518 - 188834 (-)
Gene ID: HRGMv2_1441_69_173
Type: TF
Location: 189129 - 189848 (-)
Gene ID: HRGMv2_1441_69_174
Type: TC
Location: 190076 - 192529 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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