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Cluster: HRGMv2_1441_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1441_69 HRGMv2_1441_69_104 109535 110893 - 2.A.33.1.1
pfam HRGMv2_1441_69 HRGMv2_1441_69_105 111161 112084 - DHH | DHHA2
STP HRGMv2_1441_69 HRGMv2_1441_69_106 112212 113165 - Glucokinase
TC HRGMv2_1441_69 HRGMv2_1441_69_107 113407 113739 - 4.A.3.2.3
TC HRGMv2_1441_69 HRGMv2_1441_69_108 113749 114051 - 4.A.3.2.9
TC HRGMv2_1441_69 HRGMv2_1441_69_109 114212 115555 - 4.A.3.2.2
CAZyme HRGMv2_1441_69 HRGMv2_1441_69_110 115676 117076 - GH1
Gene ID: HRGMv2_1441_69_104
Type: TC
Location: 109535 - 110893 (-)
Gene ID: HRGMv2_1441_69_105
Type: pfam
Location: 111161 - 112084 (-)
Gene ID: HRGMv2_1441_69_106
Type: STP
Location: 112212 - 113165 (-)
Gene ID: HRGMv2_1441_69_107
Type: TC
Location: 113407 - 113739 (-)
Gene ID: HRGMv2_1441_69_108
Type: TC
Location: 113749 - 114051 (-)
Gene ID: HRGMv2_1441_69_109
Type: TC
Location: 114212 - 115555 (-)
Gene ID: HRGMv2_1441_69_110
Type: CAZyme
Location: 115676 - 117076 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1441_69_108 vegan > omnivore 1.00355 0.00701

🧭 Explore Read Mapping of CGC

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