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Cluster: HRGMv2_1441_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1441_69 HRGMv2_1441_69_41 48477 48815 - 4.A.3.1.2
TF HRGMv2_1441_69 HRGMv2_1441_69_42 49030 50034 - LacI
TC HRGMv2_1441_69 HRGMv2_1441_69_43 50391 52166 + 4.A.3.1.1
CAZyme HRGMv2_1441_69 HRGMv2_1441_69_44 52233 53672 + GH1
TF HRGMv2_1441_69 HRGMv2_1441_69_45 54008 55018 - LacI
TC HRGMv2_1441_69 HRGMv2_1441_69_46 55292 57070 + 4.A.3.1.1
CAZyme HRGMv2_1441_69 HRGMv2_1441_69_47 57146 58567 + GH1
Gene ID: HRGMv2_1441_69_41
Type: TC
Location: 48477 - 48815 (-)
Gene ID: HRGMv2_1441_69_42
Type: TF
Location: 49030 - 50034 (-)
Gene ID: HRGMv2_1441_69_43
Type: TC
Location: 50391 - 52166 (+)
Gene ID: HRGMv2_1441_69_44
Type: CAZyme
Location: 52233 - 53672 (+)
Gene ID: HRGMv2_1441_69_45
Type: TF
Location: 54008 - 55018 (-)
Gene ID: HRGMv2_1441_69_46
Type: TC
Location: 55292 - 57070 (+)
Gene ID: HRGMv2_1441_69_47
Type: CAZyme
Location: 57146 - 58567 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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