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Cluster: HRGMv2_1440_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1440_15 HRGMv2_1440_15_11 10570 11454 - CE7
TC HRGMv2_1440_15 HRGMv2_1440_15_12 11628 12455 - 3.A.1.5.27
TC HRGMv2_1440_15 HRGMv2_1440_15_13 12456 14471 - 3.A.1.5.25
TC HRGMv2_1440_15 HRGMv2_1440_15_14 14475 15431 - 3.A.1.5.38
TC HRGMv2_1440_15 HRGMv2_1440_15_15 15589 17202 - 3.A.1.5.27
pfam HRGMv2_1440_15 HRGMv2_1440_15_16 17568 19508 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1440_15 HRGMv2_1440_15_17 19515 21197 - 2.A.66.4.4
Gene ID: HRGMv2_1440_15_11
Type: CAZyme
Location: 10570 - 11454 (-)
Gene ID: HRGMv2_1440_15_12
Type: TC
Location: 11628 - 12455 (-)
Gene ID: HRGMv2_1440_15_13
Type: TC
Location: 12456 - 14471 (-)
Gene ID: HRGMv2_1440_15_14
Type: TC
Location: 14475 - 15431 (-)
Gene ID: HRGMv2_1440_15_15
Type: TC
Location: 15589 - 17202 (-)
Gene ID: HRGMv2_1440_15_16
Type: pfam
Location: 17568 - 19508 (-)
Gene ID: HRGMv2_1440_15_17
Type: TC
Location: 19515 - 21197 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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