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Cluster: HRGMv2_1440_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1440_7 HRGMv2_1440_7_11 14679 17129 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1440_7 HRGMv2_1440_7_12 17151 17270 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1440_7 HRGMv2_1440_7_13 17354 18073 + GntR
TC HRGMv2_1440_7 HRGMv2_1440_7_14 18380 19696 + 3.A.1.1.45
TC HRGMv2_1440_7 HRGMv2_1440_7_15 19784 20638 + 3.A.1.1.45
TC HRGMv2_1440_7 HRGMv2_1440_7_16 20638 21477 + 3.A.1.1.45
TC HRGMv2_1440_7 HRGMv2_1440_7_17 21546 22745 + 3.A.1.1.22
CAZyme HRGMv2_1440_7 HRGMv2_1440_7_18 23211 25478 - GT35
CAZyme HRGMv2_1440_7 HRGMv2_1440_7_19 25607 27112 - GH77
Gene ID: HRGMv2_1440_7_11
Type: TC
Location: 14679 - 17129 (-)
Gene ID: HRGMv2_1440_7_12
Type:
Location: 17151 - 17270 (+)
Gene ID: HRGMv2_1440_7_13
Type: TF
Location: 17354 - 18073 (+)
Gene ID: HRGMv2_1440_7_14
Type: TC
Location: 18380 - 19696 (+)
Gene ID: HRGMv2_1440_7_15
Type: TC
Location: 19784 - 20638 (+)
Gene ID: HRGMv2_1440_7_16
Type: TC
Location: 20638 - 21477 (+)
Gene ID: HRGMv2_1440_7_17
Type: TC
Location: 21546 - 22745 (+)
Gene ID: HRGMv2_1440_7_18
Type: CAZyme
Location: 23211 - 25478 (-)
Gene ID: HRGMv2_1440_7_19
Type: CAZyme
Location: 25607 - 27112 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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