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Cluster: HRGMv2_1439_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1439_12 HRGMv2_1439_12_28 35608 37284 + 3.A.1.5.35
TC HRGMv2_1439_12 HRGMv2_1439_12_29 37441 38478 + 3.A.1.5.37
TC HRGMv2_1439_12 HRGMv2_1439_12_30 38493 39428 + 3.A.1.5.11
TC HRGMv2_1439_12 HRGMv2_1439_12_31 39431 40522 + 3.A.1.5.34
TC HRGMv2_1439_12 HRGMv2_1439_12_32 40523 41551 + 3.A.1.5.36
STP HRGMv2_1439_12 HRGMv2_1439_12_33 42294 44639 + GAF | SpoIIE
STP HRGMv2_1439_12 HRGMv2_1439_12_34 44721 45467 + STAS
CAZyme HRGMv2_1439_12 HRGMv2_1439_12_35 46212 47606 + GH13_30
Gene ID: HRGMv2_1439_12_28
Type: TC
Location: 35608 - 37284 (+)
Gene ID: HRGMv2_1439_12_29
Type: TC
Location: 37441 - 38478 (+)
Gene ID: HRGMv2_1439_12_30
Type: TC
Location: 38493 - 39428 (+)
Gene ID: HRGMv2_1439_12_31
Type: TC
Location: 39431 - 40522 (+)
Gene ID: HRGMv2_1439_12_32
Type: TC
Location: 40523 - 41551 (+)
Gene ID: HRGMv2_1439_12_33
Type: STP
Location: 42294 - 44639 (+)
Gene ID: HRGMv2_1439_12_34
Type: STP
Location: 44721 - 45467 (+)
Gene ID: HRGMv2_1439_12_35
Type: CAZyme
Location: 46212 - 47606 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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