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Cluster: HRGMv2_1439_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1439_12 HRGMv2_1439_12_10 13644 15326 + 2.A.66.4.4
pfam HRGMv2_1439_12 HRGMv2_1439_12_11 15333 17273 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1439_12 HRGMv2_1439_12_12 17639 19252 + 3.A.1.5.27
TC HRGMv2_1439_12 HRGMv2_1439_12_13 19410 20366 + 3.A.1.5.38
TC HRGMv2_1439_12 HRGMv2_1439_12_14 20370 22385 + 3.A.1.5.25
TC HRGMv2_1439_12 HRGMv2_1439_12_15 22386 23213 + 3.A.1.5.27
CAZyme HRGMv2_1439_12 HRGMv2_1439_12_16 23345 24271 + CE7
Gene ID: HRGMv2_1439_12_10
Type: TC
Location: 13644 - 15326 (+)
Gene ID: HRGMv2_1439_12_11
Type: pfam
Location: 15333 - 17273 (+)
Gene ID: HRGMv2_1439_12_12
Type: TC
Location: 17639 - 19252 (+)
Gene ID: HRGMv2_1439_12_13
Type: TC
Location: 19410 - 20366 (+)
Gene ID: HRGMv2_1439_12_14
Type: TC
Location: 20370 - 22385 (+)
Gene ID: HRGMv2_1439_12_15
Type: TC
Location: 22386 - 23213 (+)
Gene ID: HRGMv2_1439_12_16
Type: CAZyme
Location: 23345 - 24271 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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