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Cluster: HRGMv2_1439_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1439_5 HRGMv2_1439_5_45 54184 54522 - 4.A.3.1.2
TF HRGMv2_1439_5 HRGMv2_1439_5_46 54737 55741 - LacI
TC HRGMv2_1439_5 HRGMv2_1439_5_47 56098 57873 + 4.A.3.1.1
CAZyme HRGMv2_1439_5 HRGMv2_1439_5_48 57944 59383 + GH1
TF HRGMv2_1439_5 HRGMv2_1439_5_49 59577 60587 - LacI
TC HRGMv2_1439_5 HRGMv2_1439_5_50 60863 62641 + 4.A.3.1.1
CAZyme HRGMv2_1439_5 HRGMv2_1439_5_51 62718 64139 + GH1
Gene ID: HRGMv2_1439_5_45
Type: TC
Location: 54184 - 54522 (-)
Gene ID: HRGMv2_1439_5_46
Type: TF
Location: 54737 - 55741 (-)
Gene ID: HRGMv2_1439_5_47
Type: TC
Location: 56098 - 57873 (+)
Gene ID: HRGMv2_1439_5_48
Type: CAZyme
Location: 57944 - 59383 (+)
Gene ID: HRGMv2_1439_5_49
Type: TF
Location: 59577 - 60587 (-)
Gene ID: HRGMv2_1439_5_50
Type: TC
Location: 60863 - 62641 (+)
Gene ID: HRGMv2_1439_5_51
Type: CAZyme
Location: 62718 - 64139 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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