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Cluster: HRGMv2_1437_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1437_8 HRGMv2_1437_8_33 34400 35629 + 2.A.1.2.25
CAZyme HRGMv2_1437_8 HRGMv2_1437_8_34 36240 37565 + GH4
TC HRGMv2_1437_8 HRGMv2_1437_8_35 37590 39170 + 4.A.1.1.3
TF HRGMv2_1437_8 HRGMv2_1437_8_36 39249 40049 + HTH_6
TC HRGMv2_1437_8 HRGMv2_1437_8_37 40242 41804 - 4.A.1.1.3
CAZyme HRGMv2_1437_8 HRGMv2_1437_8_38 41887 43212 - GH4
Gene ID: HRGMv2_1437_8_33
Type: TC
Location: 34400 - 35629 (+)
Gene ID: HRGMv2_1437_8_34
Type: CAZyme
Location: 36240 - 37565 (+)
Gene ID: HRGMv2_1437_8_35
Type: TC
Location: 37590 - 39170 (+)
Gene ID: HRGMv2_1437_8_36
Type: TF
Location: 39249 - 40049 (+)
Gene ID: HRGMv2_1437_8_37
Type: TC
Location: 40242 - 41804 (-)
Gene ID: HRGMv2_1437_8_38
Type: CAZyme
Location: 41887 - 43212 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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