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Cluster: HRGMv2_1437_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1437_57 HRGMv2_1437_57_1 2 316 - 4.A.3.1.2
TF HRGMv2_1437_57 HRGMv2_1437_57_2 531 1535 - LacI
TC HRGMv2_1437_57 HRGMv2_1437_57_3 1893 3668 + 4.A.3.1.1
CAZyme HRGMv2_1437_57 HRGMv2_1437_57_4 3735 5174 + GH1
TF HRGMv2_1437_57 HRGMv2_1437_57_5 5441 6478 - LacI
CAZyme HRGMv2_1437_57 HRGMv2_1437_57_6 6820 8262 + GH1
TC HRGMv2_1437_57 HRGMv2_1437_57_7 8438 10198 + 4.A.3.1.1
TF HRGMv2_1437_57 HRGMv2_1437_57_8 10452 11453 - LacI
TC HRGMv2_1437_57 HRGMv2_1437_57_9 11738 13516 + 4.A.3.1.1
CAZyme HRGMv2_1437_57 HRGMv2_1437_57_10 13593 15014 + GH1
Gene ID: HRGMv2_1437_57_1
Type: TC
Location: 2 - 316 (-)
Gene ID: HRGMv2_1437_57_2
Type: TF
Location: 531 - 1535 (-)
Gene ID: HRGMv2_1437_57_3
Type: TC
Location: 1893 - 3668 (+)
Gene ID: HRGMv2_1437_57_4
Type: CAZyme
Location: 3735 - 5174 (+)
Gene ID: HRGMv2_1437_57_5
Type: TF
Location: 5441 - 6478 (-)
Gene ID: HRGMv2_1437_57_6
Type: CAZyme
Location: 6820 - 8262 (+)
Gene ID: HRGMv2_1437_57_7
Type: TC
Location: 8438 - 10198 (+)
Gene ID: HRGMv2_1437_57_8
Type: TF
Location: 10452 - 11453 (-)
Gene ID: HRGMv2_1437_57_9
Type: TC
Location: 11738 - 13516 (+)
Gene ID: HRGMv2_1437_57_10
Type: CAZyme
Location: 13593 - 15014 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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