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Cluster: HRGMv2_1437_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1437_2 HRGMv2_1437_2_58 57963 59321 - 2.A.33.1.1
pfam HRGMv2_1437_2 HRGMv2_1437_2_59 59589 60512 - DHH | DHHA2
STP HRGMv2_1437_2 HRGMv2_1437_2_60 60679 61632 - Glucokinase
TC HRGMv2_1437_2 HRGMv2_1437_2_61 61874 62206 - 4.A.3.2.3
TC HRGMv2_1437_2 HRGMv2_1437_2_62 62216 62518 - 4.A.3.2.9
TC HRGMv2_1437_2 HRGMv2_1437_2_63 62672 64024 - 4.A.3.2.2
CAZyme HRGMv2_1437_2 HRGMv2_1437_2_64 64145 65545 - GH1
Gene ID: HRGMv2_1437_2_58
Type: TC
Location: 57963 - 59321 (-)
Gene ID: HRGMv2_1437_2_59
Type: pfam
Location: 59589 - 60512 (-)
Gene ID: HRGMv2_1437_2_60
Type: STP
Location: 60679 - 61632 (-)
Gene ID: HRGMv2_1437_2_61
Type: TC
Location: 61874 - 62206 (-)
Gene ID: HRGMv2_1437_2_62
Type: TC
Location: 62216 - 62518 (-)
Gene ID: HRGMv2_1437_2_63
Type: TC
Location: 62672 - 64024 (-)
Gene ID: HRGMv2_1437_2_64
Type: CAZyme
Location: 64145 - 65545 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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