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Cluster: HRGMv2_1437_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1437_20 HRGMv2_1437_20_11 11792 13297 + GH77
CAZyme HRGMv2_1437_20 HRGMv2_1437_20_12 13426 15693 + GT35
TC HRGMv2_1437_20 HRGMv2_1437_20_13 16150 17349 - 3.A.1.1.22
TC HRGMv2_1437_20 HRGMv2_1437_20_14 17418 18257 - 3.A.1.1.45
TC HRGMv2_1437_20 HRGMv2_1437_20_15 18257 19111 - 3.A.1.1.45
TC HRGMv2_1437_20 HRGMv2_1437_20_16 19199 20515 - 3.A.1.1.45
TF HRGMv2_1437_20 HRGMv2_1437_20_17 20822 21541 - GntR
TC HRGMv2_1437_20 HRGMv2_1437_20_18 21769 24219 + 4.A.1.1.8
Gene ID: HRGMv2_1437_20_11
Type: CAZyme
Location: 11792 - 13297 (+)
Gene ID: HRGMv2_1437_20_12
Type: CAZyme
Location: 13426 - 15693 (+)
Gene ID: HRGMv2_1437_20_13
Type: TC
Location: 16150 - 17349 (-)
Gene ID: HRGMv2_1437_20_14
Type: TC
Location: 17418 - 18257 (-)
Gene ID: HRGMv2_1437_20_15
Type: TC
Location: 18257 - 19111 (-)
Gene ID: HRGMv2_1437_20_16
Type: TC
Location: 19199 - 20515 (-)
Gene ID: HRGMv2_1437_20_17
Type: TF
Location: 20822 - 21541 (-)
Gene ID: HRGMv2_1437_20_18
Type: TC
Location: 21769 - 24219 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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