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Cluster: HRGMv2_1436_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1436_2 HRGMv2_1436_2_3 742 3084 - 3.A.3.5.15
TC HRGMv2_1436_2 HRGMv2_1436_2_4 3645 5915 + 1.I.1.1.3
TC HRGMv2_1436_2 HRGMv2_1436_2_5 6253 6765 + 4.A.1.2.2
pfam HRGMv2_1436_2 HRGMv2_1436_2_6 6772 7638 + PRD | PRD | CAT_RBD
TC HRGMv2_1436_2 HRGMv2_1436_2_7 7737 9353 + 4.A.1.1.3
CAZyme HRGMv2_1436_2 HRGMv2_1436_2_8 9357 10739 + GH4
Gene ID: HRGMv2_1436_2_3
Type: TC
Location: 742 - 3084 (-)
Gene ID: HRGMv2_1436_2_4
Type: TC
Location: 3645 - 5915 (+)
Gene ID: HRGMv2_1436_2_5
Type: TC
Location: 6253 - 6765 (+)
Gene ID: HRGMv2_1436_2_6
Type: pfam
Location: 6772 - 7638 (+)
Gene ID: HRGMv2_1436_2_7
Type: TC
Location: 7737 - 9353 (+)
Gene ID: HRGMv2_1436_2_8
Type: CAZyme
Location: 9357 - 10739 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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